The Center for Computational Science



News

Major Update to LINCS Data Portal 2.0 with New Functionalities

Major Update to LINCS Data Portal 2.0 with New Functionalities

The first major update introduces substantial changes and supports new integrative and analytical capabilities for both computational and non-computational researchers.

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Digital Trends interviews Dr. Tsinoremas on Cutting-Edge Supercomputing

Digital Trends interviews Dr. Tsinoremas on Cutting-Edge Supercomputing

Dr, Tsinoremas appeared on the YouTube Digital Trends LIVE channel, and spoke about how cutting-edge supercomputing will revolutionize research and accelerate innovation.

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UM will be first to Adopt AT&T’s 5G+ Service & Edge Technology

UM will be first to Adopt AT&T’s 5G+ Service & Edge Technology

In collaboration with AT&T, UM will be able to support 5G using millimeter wave spectrum (“5G+”) and Edge technology on the Gables campus, placing the U at the forefront of digital transformation impacting every field . . .

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Big Data + VizUM Call for Posters Deadline Extended to 11/15

Big Data + VizUM Call for Posters Deadline Extended to 11/15

Submission Deadline extended to 11/15/2019! Data and Computational Scientists from the south Florida research community are invited to submit abstracts . . .

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Need help with Advanced Computing? Stop by during Office Hours

Need help with Advanced Computing? Stop by during Office Hours

The Advanced Computing team offers office hours on all 3 campuses to provide assistance with queuing inquiries, software installation, and troubleshooting.

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Software Carpentry-R Workshop 12/2-3/2019 RSMAS Campus

Software Carpentry-R Workshop 12/2-3/2019 RSMAS Campus

This workshop is designed to provide a foundation of basic concepts that all programming depends on, using R as an example.

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Save the Date 12/11/2019 as VizUM Joins the Big Data Conference

Save the Date 12/11/2019 as VizUM Joins the Big Data Conference

CCS, in collaboration with the College of Arts and Sciences and the Miami Business School invites you to participate in panel discussions on Big Data.

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Introduction to TRITON Workshop-Medical campus 12/13/2019

Introduction to TRITON Workshop-Medical campus 12/13/2019

Learn how to create a Triton account, utilize the pre-installed software, and best practices for using the new features on Triton for problem areas such as Deep Learning and Data Science.

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Focus Areas

Research Highlights

"Enrico Capobianco Receives Two Grants for Bioinformatics Research

Collaborators with combined expertise in molecular neurobiology and large data analysis apply their knowledge to neurodegenerative diseases.

"The Krüppel-Like Factor Gene Target Dusp14 Regulates Axon Growth and Regeneration

Results link intrinsic and extrinsic regulators of axon growth and suggest modulation of the KLF9-Dusp14 pathway as a potential approach to . . .

"17th IEEE Int’l Conference on Machine Learning and Applications

Mitsu Ogihara and Gang Ren presented a paper the IEEE International Conference on Machine Learning and Applications

"DrugCentral 2018: An Update

DrugCentral is a drug information resource open to the public since 2016 and previously described in the 2017 Nucleic Acids Research Database issue.

"Structural Interactions of Resveratrol With Its Bandwagon of Targets

An overview of the varied patterns and profiles of resveratrol target proteins and the structural aspects of resveratrol binding with its multiple targets as available in the PDB . . .

"The Effect of Jun Dimerization on Neurite Outgrowth and Motif Binding

Past CCS Fellow (2015-2016) Matt Danzi and Dr. Vance Lemon work together on Axon Regeneration and spinal cord injury recovery.

"Sustainable Data and Metadata Management at the BD2K-LINCS DCIC

Here we describe the end-to-end data processing and management at the DCIC to generate a high-quality and persistent product.

"Simulated Microgravity Impairs Cardiac Autonomic Neurogenesis from Neural Crest Cells

We hypothesized that microgravity can impair NC-derived cardiac structures . . .

"CARM1 Is Essential for Myeloid Leukemogenesis but Dispensable for Normal Hematopoiesis

Here, we investigated the role of CARM1 in normal and malignant hematopoiesis.

"The South Pacific Meridional Mode as a Thermally Drive Source of ENSO Amplitude Modulation and Uncertainty

This study seeks to identify thermally driven sources of ENSO amplitude and uncertainty, as they are relatively unexplored compared to wind-driven sources.

"An Early Behavioral Index of ASD From Automated Microanalysis of Movement Dynamics

In this study, we employed microanalytic, automated measurement to examine head movement coordination between infants and parents.

"Breaking Away: The Role of Homeostatic Drive in Perpetuating Depression

We propose that the complexity of regulatory interactions modulating brain neurochemistry and behavior is such that multiple stable responses may be supported . . .

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