Team – Computational Biology & Bioinformatics

  • <p><em>Lead Senior Bioinformatics Scientist</p></em>

Enrico Capobianco holds a Doctorate in Statistical Sciences from the University of Padua.  After conducting graduate studies at LSE (London, UK), Northwestern University, and 
UC Berkeley, he pursued research in computational fields at Stanford University (US) (1994-1998).  He received a NATO-CNR grant in Denmark (Niels Bohr Institute and Danish Technical University) and later (2001-2002) became an ERCIM fellow at CWI (Center for Mathematics and Computer Science) in  Amsterdam (NL).He returned to US in 2003 working for as

    Enrico Capobianco, PhD

    Lead Senior Bioinformatics Scientist

    Enrico Capobianco holds a Doctorate in Statistical Sciences from the University of Padua. After conducting graduate studies at LSE (London, UK), Northwestern University, and UC Berkeley, he pursued research in computational fields at Stanford University (US) (1994-1998). He received a NATO-CNR grant in Denmark (Niels Bohr Institute and Danish Technical University) and later (2001-2002) became an ERCIM fellow at CWI (Center for Mathematics and Computer Science) in Amsterdam (NL).He returned to US in 2003 working for as More...
  • <p><em>Professor, Department of Medicine<br>
Professor, Department of Epidemiology and Public Health</p></em>

Dr. Clarke joined the University of Miami in September 2009. He holds  appointments with the Department of Medicine, the Department of  Epidemiology and Public Health, and with the Center for Computational  Science. His main area of interest is model uncertainty and prediction.  His earlier work included prior selection and asymptotics, as well as  some aspects of network modeling in biological systems. His book on the  Theory of Data Mining and Machine Learning was published in July 2009  and he looks forward to writing another book on model reselection in  predictive systems.

    Bertrand Clarke, PhD

    Professor, Department of Medicine
    Professor, Department of Epidemiology and Public Health

    Dr. Clarke joined the University of Miami in September 2009. He holds appointments with the Department of Medicine, the Department of Epidemiology and Public Health, and with the Center for Computational Science. His main area of interest is model uncertainty and prediction. His earlier work included prior selection and asymptotics, as well as some aspects of network modeling in biological systems. His book on the Theory of Data Mining and Machine Learning was published in July 2009 and he looks forward to writing another book on model reselection in predictive systems. More...
  • <p><em>Associate Scientist, Bioinformatics Core</p></em>

Dr. Issac earned his Masters and Bachelors of Science degree from Mahatma Gandhi University, Kottayam, India.  He later received his PhD from Jawaharlal Nehru University, India in 2005. Since then, he has gained extensive experience in bioinformatics analysis of Microarrays and Next-Generation sequencing analysis. Dr. Issac wrote his first web server in 2002 on identifying protein coding genes in microbial and mammalian genomes using a combinatorial approach. Later, he joined a structural bioinformatics lab

    Biju Issac, PhD

    Associate Scientist, Bioinformatics Core

    Dr. Issac earned his Masters and Bachelors of Science degree from Mahatma Gandhi University, Kottayam, India. He later received his PhD from Jawaharlal Nehru University, India in 2005. Since then, he has gained extensive experience in bioinformatics analysis of Microarrays and Next-Generation sequencing analysis. Dr. Issac wrote his first web server in 2002 on identifying protein coding genes in microbial and mammalian genomes using a combinatorial approach. Later, he joined a structural bioinformatics lab More...
  • <p><em>Bioinformatics Associate Scientist</p></em>

Dr. Jiang received his Ph.D. in Evolutionary Biology from Louisiana  State University in 2006, and then spent one year working on genome  annotation projects at Scripps Florida. His main projects at CCS can be  divided into two categories. The first is genome assembling using next  generation sequencing (NGS) data and genome annotation, his expertise  includes both prokaryotic and eukaryotic genomes, run on two different  NGS platforms. His second focus is gene expression analysis, working  with microarray data as well as NGS data. This latter allows him to  maintain an

    Zhijie Jiang, PhD

    Bioinformatics Associate Scientist

    Dr. Jiang received his Ph.D. in Evolutionary Biology from Louisiana State University in 2006, and then spent one year working on genome annotation projects at Scripps Florida. His main projects at CCS can be divided into two categories. The first is genome assembling using next generation sequencing (NGS) data and genome annotation, his expertise includes both prokaryotic and eukaryotic genomes, run on two different NGS platforms. His second focus is gene expression analysis, working with microarray data as well as NGS data. This latter allows him to maintain an More...
  • <p><em>Graduate Fellowship Student</p></em>

Hemalatha Raju is a PhD student in Human Genetics and Genomics at the University of Miami. She received her BS in Physics and a master in Biophysics from the University of Chennai, India. Her research interests include analyzing next-generations sequencing data using different NGS tools (Bowtie, BWA, TopHat, and Cufflinks), designing pipeline to identify and analyze non-coding RNA in the transcriptome, classify the functional non-coding RNAs.

    Hemalatha Raju, PhD

    Graduate Fellowship Student

    Hemalatha Raju is a PhD student in Human Genetics and Genomics at the University of Miami. She received her BS in Physics and a master in Biophysics from the University of Chennai, India. Her research interests include analyzing next-generations sequencing data using different NGS tools (Bowtie, BWA, TopHat, and Cufflinks), designing pipeline to identify and analyze non-coding RNA in the transcriptome, classify the functional non-coding RNAs. More...
  • <p><em>Bioinformatics Assistant Scientist</p></em>

Daria Salyakina, PhD is an Assistant Scientist at Center for  Computational Science. She obtained her Master’s degree in Genetics from  Tomsk State University in Russia and gained her PhD in Statistical  Genetics from the Technical University Munich in Germany. Dr.  Salyakina’s areas of expertise include Genetic Epidemiology, Human  Genetics, Bioinformatics and Biostatistics. She earned her most  experience in identification of genomic and environmental risk factors  attributing to various complex disorders. Her present research is  focused on the

    Daria Salyakina, PhD

    Bioinformatics Assistant Scientist

    Daria Salyakina, PhD is an Assistant Scientist at Center for Computational Science. She obtained her Master’s degree in Genetics from Tomsk State University in Russia and gained her PhD in Statistical Genetics from the Technical University Munich in Germany. Dr. Salyakina’s areas of expertise include Genetic Epidemiology, Human Genetics, Bioinformatics and Biostatistics. She earned her most experience in identification of genomic and environmental risk factors attributing to various complex disorders. Her present research is focused on the More...
  • <p><em>Bioinformatics Senior Research Analyst </p></em>

Camilo gained two B.S. degrees in Biology and in Computer Science  from Florida International University, and is currently enrolled in a  Masters program in Bioinformatics at FIU. He is a senior analyst for  gene expression analysis from microarray datasets. He has experience  with several microarray platforms, and has worked with data from  different species. His expertise includes performing differential  expression analyses of regulated genes using various analysis  algorithms, along with pathways analysis and gene-set enrichment  analysis.

    Camilo Valdes

    Bioinformatics Senior Research Analyst

    Camilo gained two B.S. degrees in Biology and in Computer Science from Florida International University, and is currently enrolled in a Masters program in Bioinformatics at FIU. He is a senior analyst for gene expression analysis from microarray datasets. He has experience with several microarray platforms, and has worked with data from different species. His expertise includes performing differential expression analyses of regulated genes using various analysis algorithms, along with pathways analysis and gene-set enrichment analysis. More...